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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015809667.1_cds_XP_016495877.1_10157
CDS Infomation

[gene=LOC107814889] [db_xref=GeneID:107814889] [protein=cytokinin dehydrogenase 1-like] [protein_id=XP_016495877.1] [location=complement(join(51486..51813,51901..52163,52430..52690,52973..53100,53617..54295))] [gbkey=CDS]
Sequence

ATGAAGTCACCACCAACTCATGTCTTCTTTAAACATAAAAGTATGCTTCTTAGGTTGCTT
ATATTCATACTAGGCATTTGCTCAATAAACAGAACTAACCTTTGTTGTGACCAACCTTTT
GCCACCCCAATATCTTCTTCTTCTTCTACCCCTTCAAGTTTTTCAGTGATTCAATCATCA
TTGAAACAGTTAAATATTGAAGGGTATTTTAGTTTCAAGAATTTCGATCACGCGGCCAAA
GACTTTGGCAACAGATATCACTTCTTGCCATCGGCAGTTCTGTATCCAAAATCAGTTTCT
GATATATCATCTACCATAAAACATGTTTTTGACATGGGTGTTACTACAGACCTAACTGTT
GCTGCTAGAGGTCATGGTCATTCTCTAGAAGGCCAAGCTCAAGCTTACCAAGGAGTAGTG
ATCAATATGGAATCGCTTCGAGCGCCAGCAATGCGTTTCCACACAGGGAATCAAGAACTG
CCTTTTGTTGATGTCTCTGCAGGAGAACTTTGGATAAACATCCTGCATGAAAGTCTTAAA
CTTGGATTAACACCAAAATCTTGGACTGATTATCTTCACCTCACCGTTGGAGGGACTTTG
TCGAATGCCGGAATCAGTGGTCAAGCATTCAAACATGGACCACAGATCAATAATGTTTAC
CAACTTGAGGTTGTCACTGGTAAAGGAGAGGTGATTACTTGTTCAGAGGAGAAGAATGCT
GACCTGTTCTATGGTGTATTAGGAGGACTAGGCCAGTTTGGTATCATCACAAGGGCTAGA
ATTGCTCTTGAACCAGCACCTAAAAAGGTAAAGTGGATCAGAGTGCTGTATTCAGATTTC
TCCACATTTTCCTATGATCAAGAACACTTGATATCATCCGAGAACTCTTTTGACTATATA
GAAGGATTTGTCATTATCAATAGAACAGGATTGTTAAACAACTGGAGGTCTACTTTCAAT
CCTAAAGATCCACTTCTAGCCAAAGAGTTCAGTTCTGAGGGAAAAGTTCTGTACTGCCTA
GAAGTTGCCAAATACTTCAATCCAGAAGAGACAACCAAAACTGATCAGAATGTTGATGTT
CTTTTATCAAAGTTGAATTATATCCAATCGACGCTGTTCCAATCAGAAGTATCCTACGTG
GATTTCCTCGACAGAGTTCACGTATCCGAGATGAAACTTCAAGAGAAGGGGTTATGGGAT
ATTCCTCATCCATGGCTAAACCTTCTAATTCCAAAGAGCAAGATTCATGACTTTGCACGA
GAAGTTTTTGGGAAGATACTTACCGACACTAGCCACGGTCCTATACTCATCTACCCAGTC
AACAAATCAAAGTGGAGAAAAGGAACATCAGTAGTTACACCTGAAGAAGATGTTATGTAT
CTAATAGCATTTCTATCTTCTGCCATGCCATCTTCAACAGGAAAGGACGGCGTAGAATAT
ATTCTAAATAAGAATAAGAAGATACTAAACTTTTGCAGAAAAGCACATATTGGAATGAAA
CAGTATTTGCCACACTACACAACGCAGGAAGACTGGAAAGGTCACTTTGGTCCCCAGTGG
GAAACATTTAAAAGGAGGAAATCTACATATGACCCTTTGGCTATCCTAGCTCCTGGCCAG
AGAATTTTTAGAAGAGCATCAGGCGTTCAACAACAATGA

Peptide Sequence

PEP ID

XP_016495877.1
PEP Infomation

PREDICTED: cytokinin dehydrogenase 1-like [Nicotiana tabacum]
Sequence

MKSPPTHVFFKHKSMLLRLLIFILGICSINRTNLCCDQPFATPISSSSSTPSSFSVIQSS
LKQLNIEGYFSFKNFDHAAKDFGNRYHFLPSAVLYPKSVSDISSTIKHVFDMGVTTDLTV
AARGHGHSLEGQAQAYQGVVINMESLRAPAMRFHTGNQELPFVDVSAGELWINILHESLK
LGLTPKSWTDYLHLTVGGTLSNAGISGQAFKHGPQINNVYQLEVVTGKGEVITCSEEKNA
DLFYGVLGGLGQFGIITRARIALEPAPKKVKWIRVLYSDFSTFSYDQEHLISSENSFDYI
EGFVIINRTGLLNNWRSTFNPKDPLLAKEFSSEGKVLYCLEVAKYFNPEETTKTDQNVDV
LLSKLNYIQSTLFQSEVSYVDFLDRVHVSEMKLQEKGLWDIPHPWLNLLIPKSKIHDFAR
EVFGKILTDTSHGPILIYPVNKSKWRKGTSVVTPEEDVMYLIAFLSSAMPSSTGKDGVEY
ILNKNKKILNFCRKAHIGMKQYLPHYTTQEDWKGHFGPQWETFKRRKSTYDPLAILAPGQ
RIFRRASGVQQQ

Transcript Sequence

Gene sequence data has not been registered.